
   20-Dec-2020 16:21:54 +0100

rootdir = ..\201126_DoreenBob_HumanBlood5\
sampleName = H10_8nlps_Warm
measNums = 10 11 12 13 14 15 16 17 18 1 2 3 4 5 6 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 574 cell sequences
cell traces covers the whole channel: 429 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 60
write results (369 cells):
----------
----------
369 cells written
Converting 'M11_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 584 cell sequences
cell traces covers the whole channel: 445 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 37
write results (408 cells):
----------
----------
408 cells written
Converting 'M12_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 599 cell sequences
cell traces covers the whole channel: 450 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 69
write results (381 cells):
----------
----------
381 cells written
Converting 'M13_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 562 cell sequences
cell traces covers the whole channel: 432 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 66
write results (366 cells):
----------
----------
366 cells written
Converting 'M14_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 664 cell sequences
cell traces covers the whole channel: 498 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 53
write results (445 cells):
----------
----------
445 cells written
Converting 'M15_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 679 cell sequences
cell traces covers the whole channel: 497 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 70
write results (427 cells):
----------
----------
427 cells written
Converting 'M16_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 619 cell sequences
cell traces covers the whole channel: 462 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 65
write results (397 cells):
----------
----------
397 cells written
Converting 'M17_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 581 cell sequences
cell traces covers the whole channel: 429 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 59
write results (370 cells):
----------
----------
370 cells written
Converting 'M18_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 605 cell sequences
cell traces covers the whole channel: 442 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 55
write results (387 cells):
----------
----------
387 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 546 cell sequences
cell traces covers the whole channel: 426 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 47
write results (379 cells):
----------
----------
379 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 687 cell sequences
cell traces covers the whole channel: 545 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 52
write results (493 cells):
----------
----------
493 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 587 cell sequences
cell traces covers the whole channel: 458 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 56
write results (402 cells):
----------
----------
402 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 589 cell sequences
cell traces covers the whole channel: 450 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 53
write results (397 cells):
----------
----------
397 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 578 cell sequences
cell traces covers the whole channel: 454 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 67
write results (387 cells):
----------
----------
387 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 89 cell sequences
cell traces covers the whole channel: 0 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 0
write results (0 cells):
----------

0 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 715 cell sequences
cell traces covers the whole channel: 527 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 55
write results (472 cells):
----------
----------
472 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 647 cell sequences
cell traces covers the whole channel: 514 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 48
write results (466 cells):
----------
----------
466 cells written
measurement: ..\201126_DoreenBob_HumanBlood5\H10_8nlps_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	574	429	369	369
11	584	445	408	408
12	599	450	381	381
13	562	432	366	366
14	664	498	445	445
15	679	497	427	427
16	619	462	397	397
17	581	429	370	370
18	605	442	387	387
1	546	426	379	379
2	687	545	493	493
3	587	458	402	402
4	589	450	397	397
5	578	454	387	387
6	89	0	0	0
8	715	527	472	472
9	647	514	466	466

   10-Mar-2022 09:24:39 +0100

rootdir = ..\201126_DoreenBob_HumanBlood5\
sampleName = 201126_H10_8nlps_Warm
measNums = 10 11 12 13 14 15 16 17 18 1 2 3 4 5 6 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 574 cell sequences
cell traces covers the whole channel: 429 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 60
write results (369 cells):
----------
----------
369 cells written
Converting 'M11_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 584 cell sequences
cell traces covers the whole channel: 445 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 37
write results (408 cells):
----------
----------
408 cells written
Converting 'M12_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 599 cell sequences
cell traces covers the whole channel: 450 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 69
write results (381 cells):
----------
----------
381 cells written
Converting 'M13_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 562 cell sequences
cell traces covers the whole channel: 432 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 66
write results (366 cells):
----------
----------
366 cells written
Converting 'M14_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 664 cell sequences
cell traces covers the whole channel: 498 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 53
write results (445 cells):
----------
----------
445 cells written
Converting 'M15_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 679 cell sequences
cell traces covers the whole channel: 497 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 70
write results (427 cells):
----------
----------
427 cells written
Converting 'M16_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 619 cell sequences
cell traces covers the whole channel: 462 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 65
write results (397 cells):
----------
----------
397 cells written
Converting 'M17_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 581 cell sequences
cell traces covers the whole channel: 429 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 59
write results (370 cells):
----------
----------
370 cells written
Converting 'M18_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 605 cell sequences
cell traces covers the whole channel: 442 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 55
write results (387 cells):
----------
----------
387 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 546 cell sequences
cell traces covers the whole channel: 426 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 47
write results (379 cells):
----------
----------
379 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 687 cell sequences
cell traces covers the whole channel: 545 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 52
write results (493 cells):
----------
----------
493 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 587 cell sequences
cell traces covers the whole channel: 458 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 56
write results (402 cells):
----------
----------
402 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 589 cell sequences
cell traces covers the whole channel: 450 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 53
write results (397 cells):
----------
----------
397 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 578 cell sequences
cell traces covers the whole channel: 454 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 67
write results (387 cells):
----------
----------
387 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 89 cell sequences
cell traces covers the whole channel: 0 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 0
write results (0 cells):
----------

0 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 715 cell sequences
cell traces covers the whole channel: 527 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 55
write results (472 cells):
----------
----------
472 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 647 cell sequences
cell traces covers the whole channel: 514 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 48
write results (466 cells):
----------
----------
466 cells written
measurement: ..\201126_DoreenBob_HumanBlood5\201126_H10_8nlps_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	574	429	369	369
11	584	445	408	408
12	599	450	381	381
13	562	432	366	366
14	664	498	445	445
15	679	497	427	427
16	619	462	397	397
17	581	429	370	370
18	605	442	387	387
1	546	426	379	379
2	687	545	493	493
3	587	458	402	402
4	589	450	397	397
5	578	454	387	387
6	89	0	0	0
8	715	527	472	472
9	647	514	466	466
